BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029F12SP1|AL429100
(889 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1778 1714 0.0
>3x_Contig1778
Length = 27694
Score = 1714 bits (861), Expect = 0.0
Identities = 873/879 (99%), Gaps = 1/879 (0%)
Strand = Plus / Plus
Query: 1 ttacgaatgctactgcaattgtcaaaaataaggctgcactgattttcagcatttttagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21113 ttacgaatgctactgcaattgtcaaaaataaggctgcactgattttcagcatttttagct 21172
Query: 61 cacttattattgctggaactcccttgctgctgcgtatatgtcaagtatcacaaaataata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21173 cacttattattgctggaactcccttgctgctgcgtatatgtcaagtatcacaaaataata 21232
Query: 121 tcaaagataatatacttctaacatgttatgttatatagagagcggagggtaggactagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21233 tcaaagataatatacttctaacatgttatgttatatagagagcggagggtaggactagaa 21292
Query: 181 aatacaattcaagtgtcgagtatttataaatttggacagtcacaaaaataacgataccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21293 aatacaattcaagtgtcgagtatttataaatttggacagtcacaaaaataacgataccaa 21352
Query: 241 taatatttgtggcagtctgtcgctgcagtttactctatattggtatgttttttttatctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21353 taatatttgtggcagtctgtcgctgcagtttactctatattggtatgttttttttatctg 21412
Query: 301 tcatcttgacacctcatgggtattgtatcgaattatggtgtctaagaaaagaaaaaggag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21413 tcatcttgacacctcatgggtattgtatcgaattatggtgtctaagaaaagaaaaaggag 21472
Query: 361 tgaacagcaagatcataactgatatgtgtgtttgatatgggaaaaggatgttattaacgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21473 tgaacagcaagatcataactgatatgtgtgtttgatatgggaaaaggatgttattaacgt 21532
Query: 421 agaattaaacgctcaatgttcggctttttcaagaaatgtttttgctgtaaaatctattta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21533 agaattaaacgctcaatgttcggctttttcaagaaatgtttttgctgtaaaatctattta 21592
Query: 481 ggatgctaatttgttatatgamgtgctttttaccaagcgaaggtaagtcagaataamaga 540
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 21593 ggatgctaatttgttatatgaagtgctttttaccaagcgaaggtaagtcagaataaaaga 21652
Query: 541 maaammagtccaataacttcaacaaaaagtgcggaagcaatagcatgatatttagaggtt 600
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21653 aaaaaaagtccaataacttcaacaaaaagtgcggaagcaatagcatgatatttagaggtt 21712
Query: 601 tttcaattttgcgaccctagtggatatttcttgaaccaatgcttctgataatccgggaaa 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21713 tttcaattttgcgaccctagtggatatttcttgaaccaatgcttctgataatccgggaaa 21772
Query: 661 atctttctccaaatctcccatgtacctggtaagtgacttgacagtttctttcgtaggctc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21773 atctttctccaaatctcccatgtacctggtaagtgacttgacagtttctttcgtaggctc 21832
Query: 721 attgatggctctttgtctaactttcttcaacgagtaaagaaagacatctttccaataatc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21833 attgatggctctttgtctaactttcttcaacgagtaaagaaagacatctttccaataatc 21892
Query: 781 aatattttgattttcatggcctagtttcatcttttgttcacttggggatgagctcacatc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21893 aatattttgattttcatggcctagtttcatcttttgttcacttggggatgagctcacatc 21952
Query: 841 ctcataactttctgtcgctggagtag-aagattggtttt 878
|||||||||||||||||||||||||| ||||||||||||
Sbjct: 21953 ctcataactttctgtcgctggagtagaaagattggtttt 21991
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7750
Number of Sequences: 1807
Number of extensions: 7750
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 889
length of database: 10,358,551
effective HSP length: 16
effective length of query: 873
effective length of database: 10,329,639
effective search space: 9017774847
effective search space used: 9017774847
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)